Welcome to the

Sen Xu Lab

Evolutionary Biology, Genomics, and Environment · Division of Biological Sciences, University of Missouri–Columbia.

Explore Our Research

Research

Evolutionary biology, genomics, and environment.

Mission

Creating an inclusive research environment where everyone is valued and empowered to conduct high quality research.

Vision

We aspire to become a world-class evolutionary genomics lab and address fundamental biological questions with innovative technologies and methodology.

Freshwater lake landscape from the Xu Lab’s original website
Origin of obligate parthenogenesis

We explore the genetic mechanisms giving rise to obligately parthenogenetic Daphnia, including incompatibility between D. pulex and D. pulicaria.

Evolution of meiotic recombination rate

We investigate genetic variants regulating recombination-rate variation using single-sperm whole-genome sequencing, population genomics, and CRISPR-Cas editing.

CRISPR gene editing

Our lab develops gene knock-out, gene knock-in, and precise base-editing methods for Daphnia to study gene function and interactions.

Environmental mutagens and genomic integrity

We study how environmental mutagens such as EMS affect mutation rates, mutation spectra, and gene expression in Daphnia.

Genetic incompatibility and postzygotic reproductive isolation

We investigate how incompatible allele combinations between diverged Daphnia lineages impair hybrid development and fitness, revealing the genetic basis of postzygotic reproductive barriers.

Single-nucleus transcriptomics and chromatin accessibility

We use single-nucleus RNA-seq and ATAC-seq to characterize cell-type-specific gene expression and chromatin accessibility in Daphnia.

Centromere and kinetochore genomics

We map centromeric regions and kinetochore-associated features to investigate chromosome segregation, genome organization, and chromosome evolution.

Research profile at Mizzou

Publications

Selected recent work · Xu Lab authors are shown in bold

View complete Google Scholar profile

People

Current lab members

Sen Xu(Principal Investigator)

Principal Investigator studying evolution, genomics, and reproduction in Daphnia.

Li Wang(Lab Manager)

Manages lab operations and Animal Master

Jaehyo Song(Scientists)

Develops multi-omics tools to investigate gene function and genome evolution in Daphnia.

Zhixiong Deng(Postdoctoral Fellow)

Studies the genetic basis of intrinsic post-zygotic barriers in Daphnia.

Xuerong Zou(PhD Student)
Tate Cseri(Undergraduate Assistant)

Research assistant in Sen Xu Lab

Vanya Ewiwile(Undergraduate Assistant)

Lab Mascot

Our four-legged lab ambassador

Max(Lab Mascot)

Max is the Xu Lab’s four-legged morale officer—specializing in warm welcomes, careful snack inspections, and keeping Daphnia research paws-itively energetic.

Lab AlumniPrevious lab members by position10 members

Postdoctoral Researchers

  • SNSwatantra NeupanePostdoctoral Researcher
  • THTrung HuynhPostdoctoral Researcher
  • HWHongjun WangPostdoctoral Researcher
  • AHAlex HallPostdoctoral Researcher
  • SKShreyas KrishnanPostdoctoral Researcher

Graduate Students

  • SNSwatantra NeupanePh.D. Student
  • THTrung HuynhPh.D. Student
  • Andrew PrichardM.S. Student
  • MSMarelize SnymanPh.D. Student
  • TPThinh PhamPh.D. Student

Open Positions

Postdoctoral researcher position

The Xu Lab is currently accepting applications for a postdoctoral researcher. Please contact Dr. Sen Xu for more information.

Contact Dr. Xu